Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0004691 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0004691_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Nbi_g23774 | |
Cluster | HCCA: Cluster_144 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g36202 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species | |
Ppi_g56375 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 39 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
MF | GO:0035673 | oligopeptide transmembrane transporter activity | IEP | HCCA |
MF | GO:0042887 | amide transmembrane transporter activity | IEP | HCCA |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:1904680 | peptide transmembrane transporter activity | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 177 | 224 |
IPR002885 | Pentatricopeptide_repeat | 382 | 427 |
IPR002885 | Pentatricopeptide_repeat | 484 | 531 |
IPR002885 | Pentatricopeptide_repeat | 76 | 122 |
IPR002885 | Pentatricopeptide_repeat | 282 | 312 |
IPR002885 | Pentatricopeptide_repeat | 50 | 74 |
IPR002885 | Pentatricopeptide_repeat | 152 | 175 |
IPR002885 | Pentatricopeptide_repeat | 561 | 584 |
IPR002885 | Pentatricopeptide_repeat | 254 | 275 |
No external refs found! |