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  5. Nbi_g22071

Nbi_g22071 (MRP6, ATMRP6, ABCC8)


Aliases : MRP6, ATMRP6, ABCC8

Description : subfamily ABCC transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g22071

Target Alias Description ECC score Gene Family Method Actions
Ala_g25843 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27220 ABCC12, MRP13, ATMRP13 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13122.t1 MRP11, ABCC13,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010546 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: CDS=81-4649 0.02 OrthoFinder output from all 47 species
Ceric.1Z171400.1 MRP11, ABCC13,... not classified & original description: pacid=50597220... 0.03 OrthoFinder output from all 47 species
Ceric.23G061900.1 ABCC1, ATABCC1,... subfamily ABCC transporter & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g18367 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019471001 ATMRP14, ABCC10, MRP14 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os05g10730.1 MRP6, ATMRP6,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Len_g51185 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14759 MRP9, ABCC9, ATMRP9 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001687 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=1-2715 0.03 OrthoFinder output from all 47 species
Sam_g26056 No alias glutathione S-conjugate transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50141 No alias subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g036160.3.1 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g06720 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41080 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45911 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 751 985
IPR011527 ABC1_TM_dom 136 400
IPR003439 ABC_transporter-like_ATP-bd 1075 1223
IPR003439 ABC_transporter-like_ATP-bd 465 599
No external refs found!