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  5. Nbi_g21916

Nbi_g21916


Description : component *(CHL-L) of light-independent protochlorophyllide oxidoreductase complex & original description: none


Gene families : OG0009362 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009362_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g21916
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Aev_g09367 No alias component *(CHL-L) of light-independent... 0.08 OrthoFinder output from all 47 species
Ala_g16972 No alias component *(CHL-L) of light-independent... 0.04 OrthoFinder output from all 47 species
Cba_g61905 No alias component *(CHL-L) of light-independent... 0.09 OrthoFinder output from all 47 species
Ceric.02G046700.1 Ceric.02G046700 component *(CHL-L) of light-independent... 0.03 OrthoFinder output from all 47 species
Ceric.04G025000.1 Ceric.04G025000 component *(CHL-L) of light-independent... 0.05 OrthoFinder output from all 47 species
Ceric.05G047600.1 Ceric.05G047600 component *(CHL-L) of light-independent... 0.13 OrthoFinder output from all 47 species
Ceric.08G067800.1 Ceric.08G067800 component *(CHL-L) of light-independent... 0.06 OrthoFinder output from all 47 species
Ceric.09G049500.1 Ceric.09G049500 component *(CHL-L) of light-independent... 0.1 OrthoFinder output from all 47 species
Ceric.18G054500.1 Ceric.18G054500 component *(CHL-L) of light-independent... 0.07 OrthoFinder output from all 47 species
Ceric.32G035700.1 ACCD, Ceric.32G035700 component *(CHL-L) of light-independent... 0.07 OrthoFinder output from all 47 species
Ceric.33G038300.1 MIND, ATMIND1,... component *(CHL-L) of light-independent... 0.07 OrthoFinder output from all 47 species
Lfl_g19196 No alias component *(CHL-L) of light-independent... 0.13 OrthoFinder output from all 47 species
Ore_g11676 No alias component *(CHL-L) of light-independent... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022701 No alias not classified & original description: CDS=1-276 0.04 OrthoFinder output from all 47 species
Tin_g15306 No alias component *(CHL-L) of light-independent... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000392 NifH/frxC 1 269
No external refs found!