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  5. Nbi_g20598

Nbi_g20598


Description : not classified & original description: none


Gene families : OG0000474 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000474_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g20598
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Ala_g19544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59058 ZAR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10063 RPP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005262 No alias not classified & original description: CDS=144-812 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005265 No alias not classified & original description: CDS=1-3588 0.04 OrthoFinder output from all 47 species
Sam_g26897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!