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  5. Nbi_g19302

Nbi_g19302 (AIB, ATAIB)


Aliases : AIB, ATAIB

Description : bHLH-type transcription factor & original description: none


Gene families : OG0001148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g19302

Target Alias Description ECC score Gene Family Method Actions
AT2G22770 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g01447 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04366 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66514.t1 Aspi01Gene66514 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003701001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Ore_g08808 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17525 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g35951 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012122_P001 Zm00001e012122 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!