Aliases : RBCS1A
Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer & original description: none
Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00079p00061090 | evm_27.TU.AmTr_v1... | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species | |
AT1G67090 | RBCS1A | ribulose bisphosphate carboxylase small chain 1A | 0.15 | OrthoFinder output from all 47 species | |
AT5G38410 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.11 | OrthoFinder output from all 47 species | |
AT5G38420 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.12 | OrthoFinder output from all 47 species | |
AT5G38430 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.05 | OrthoFinder output from all 47 species | |
Ala_g09842 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.1 | OrthoFinder output from all 47 species | |
Aob_g09818 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g24117 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g33021 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
Aob_g41554 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.09G050600.1 | RBCS1A, Ceric.09G050600 | small subunit of ribulose-1,5-bisphosphat... | 0.14 | OrthoFinder output from all 47 species | |
Ceric.09G050700.1 | RBCS1A, Ceric.09G050700 | small subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species | |
Ceric.09G050800.1 | RBCS1A, Ceric.09G050800 | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
Ceric.09G050900.1 | RBCS1A, Ceric.09G050900 | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.09G051100.1 | RBCS1A, Ceric.09G051100 | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.09G051200.1 | RBCS1A, Ceric.09G051200 | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.09G051300.1 | RBCS1A, Ceric.09G051300 | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.09G051400.1 | RBCS1A, Ceric.09G051400 | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.09G051500.1 | RBCS1A, Ceric.09G051500 | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.09G051600.1 | RBCS1A, Ceric.09G051600 | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.09G051700.1 | RBCS1A, Ceric.09G051700 | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.09G051800.1 | RBCS1A, Ceric.09G051800 | small subunit of ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
Ceric.09G051900.1 | RBCS1A, Ceric.09G051900 | small subunit of ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
Cre02.g120100 | RBCS1A | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g09882 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g20638 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g33446 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g51202 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Dde_g36766 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
Ehy_g04204 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
GSVIVT01008288001 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
Gb_00380 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.11 | OrthoFinder output from all 47 species | |
Gb_00381 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os12g17600.1 | RBCS1A, LOC_Os12g17600 | small subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os12g19381.1 | RBCS1A, LOC_Os12g19381 | small subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os12g19470.2 | RBCS1A, LOC_Os12g19470 | small subunit of ribulose-1,5-bisphosphat... | 0.11 | OrthoFinder output from all 47 species | |
MA_47626g0010 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.13 | OrthoFinder output from all 47 species | |
Mp4g06030.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g06050.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Mp4g10850.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Mp4g15070.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g15080.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Pir_g54622 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species | |
Pir_g63695 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c13_15786V3.1 | Pp3c13_15786 | No annotation | 0.03 | OrthoFinder output from all 47 species | |
Pp3c13_15980V3.1 | RBCS1A, Pp3c13_15980 | ribulose bisphosphate carboxylase small chain 1A | 0.03 | OrthoFinder output from all 47 species | |
Pp3c3_14510V3.1 | RBCS1A, Pp3c3_14510 | ribulose bisphosphate carboxylase small chain 1A | 0.03 | OrthoFinder output from all 47 species | |
Pp3c3_20140V3.1 | RBCS1A, Pp3c3_20140 | ribulose bisphosphate carboxylase small chain 1A | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g32726 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.07 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0124.g021603 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.07 | OrthoFinder output from all 47 species | |
Sam_g23016 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.07 | OrthoFinder output from all 47 species | |
Sam_g36381 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Smo147927 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Solyc02g063150.3.1 | Solyc02g063150 | small subunit of ribulose-1,5-bisphosphat... | 0.13 | OrthoFinder output from all 47 species | |
Solyc02g085950.4.1 | Solyc02g085950 | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
Solyc03g034220.3.1 | Solyc03g034220 | small subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | HCCA |
MF | GO:0004618 | phosphoglycerate kinase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
MF | GO:0005507 | copper ion binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
CC | GO:0009512 | cytochrome b6f complex | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009522 | photosystem I | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015252 | proton channel activity | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
CC | GO:0070069 | cytochrome complex | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000894 | RuBisCO_ssu_dom | 65 | 174 |
No external refs found! |