AT1G70370 (PG2)


Aliases : PG2

Description : polygalacturonase 2


Gene families : OG_01_0002894 (Gene family) Phylogenetic Tree(s): OG0002894_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G70370
Cluster HCCA cluster: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007771001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family
GSVIVT01013722001 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
Zm00001d020122 GRMZM2G146665 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process RCA Arabidopsis.org
BP GO:0000272 polysaccharide catabolic process RCA Arabidopsis.org
MF GO:0004650 polygalacturonase activity ISS Arabidopsis.org
CC GO:0005576 extracellular region ISM Arabidopsis.org
BP GO:0005982 starch metabolic process RCA Arabidopsis.org
BP GO:0007389 pattern specification process RCA Arabidopsis.org
BP GO:0008150 biological_process ND Arabidopsis.org
BP GO:0008361 regulation of cell size RCA Arabidopsis.org
BP GO:0009664 plant-type cell wall organization RCA Arabidopsis.org
BP GO:0009825 multidimensional cell growth RCA Arabidopsis.org
BP GO:0009832 plant-type cell wall biogenesis RCA Arabidopsis.org
BP GO:0009926 auxin polar transport RCA Arabidopsis.org
BP GO:0009932 cell tip growth RCA Arabidopsis.org
BP GO:0010015 root morphogenesis RCA Arabidopsis.org
BP GO:0010075 regulation of meristem growth RCA Arabidopsis.org
BP GO:0010817 regulation of hormone levels RCA Arabidopsis.org
BP GO:0040007 growth RCA Arabidopsis.org
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light RCA Arabidopsis.org
BP GO:0048653 anther development RCA Arabidopsis.org
BP GO:0048767 root hair elongation RCA Arabidopsis.org
BP GO:0071555 cell wall organization RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004873 BURP_dom 411 623
No external refs found!