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  5. Nbi_g13670

Nbi_g13670


Description : not classified & original description: none


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13670
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00200060 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00051500 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
AT1G03050 No alias ENTH/ANTH/VHS superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G25430 No alias epsin N-terminal homology (ENTH) domain-containing... 0.05 OrthoFinder output from all 47 species
AT4G02650 No alias ENTH/ANTH/VHS superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G25940 No alias ENTH/ANTH/VHS superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G35200 No alias ENTH/ANTH/VHS superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g015730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04040 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40710.t1 Aspi01Gene40710 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63284.t1 Aspi01Gene63284 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0029.g024143 No alias not classified & original description: CDS=1-1854 0.03 OrthoFinder output from all 47 species
Dac_g43641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029746001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
Gb_31324 No alias Probable clathrin assembly protein At4g32285... 0.03 OrthoFinder output from all 47 species
LOC_Os03g16800.1 LOC_Os03g16800 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
LOC_Os06g45050.1 LOC_Os06g45050 Putative clathrin assembly protein At5g57200... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48630.1 LOC_Os06g48630 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
Nbi_g09369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13944 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09579 No alias accessory protein *(PlCALM3) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g11926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12085 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022248 No alias not classified & original description: CDS=1-1188 0.03 OrthoFinder output from all 47 species
Solyc02g043810.4.1 Solyc02g043810 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
Solyc07g008060.1.1 Solyc07g008060 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.02 OrthoFinder output from all 47 species
Solyc12g006000.1.1 Solyc12g006000 clathrin assembly protein (AP180) 0.03 OrthoFinder output from all 47 species
Solyc12g010530.3.1 Solyc12g010530 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species
Spa_g07378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027027_P002 Zm00001e027027 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
Zm00001e031059_P001 Zm00001e031059 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
Zm00001e038481_P001 Zm00001e038481 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 33 374
No external refs found!