MA_6146g0010


Description : plastidial mRNA processing factor (PPR10)


Gene families : OG_01_0002673 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002673_tree ,
OG_02_0001952 (LandPlants) Phylogenetic Tree(s): OG_02_0001952_tree ,
OG_03_0001479 (SeedPlants) Phylogenetic Tree(s): OG_03_0001479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_6146g0010
Cluster HCCA: Cluster_479

Target Alias Description ECC score Gene Family Method Actions
Gb_13589 No alias plastidial mRNA processing factor (PPR10) 0.03 Archaeplastida
MA_8893308g0010 No alias plastidial mRNA processing factor (PPR10) 0.04 Archaeplastida
MA_96691g0010 No alias plastidial mRNA processing factor (PPR10) 0.03 Archaeplastida
AMTR_s00029p00034550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.02 LandPlants
AMTR_s00029p00034670 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.02 LandPlants
GSVIVT01029248001 No alias Pentatricopeptide repeat-containing protein At2g18940,... 0.02 LandPlants
Gb_13589 No alias plastidial mRNA processing factor (PPR10) 0.03 LandPlants
MA_8893308g0010 No alias plastidial mRNA processing factor (PPR10) 0.04 LandPlants
MA_96691g0010 No alias plastidial mRNA processing factor (PPR10) 0.03 LandPlants
Zm00001e030419_P001 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
Zm00001e035434_P001 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
AMTR_s00001p00272430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g18940,... 0.02 SeedPlants
AMTR_s00029p00034670 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.02 SeedPlants
AT5G02860 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 SeedPlants
GSVIVT01029248001 No alias Pentatricopeptide repeat-containing protein At2g18940,... 0.02 SeedPlants
Gb_13589 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants
LOC_Os07g40120.1 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants
MA_8893308g0010 No alias plastidial mRNA processing factor (PPR10) 0.04 SeedPlants
MA_96691g0010 No alias plastidial mRNA processing factor (PPR10) 0.03 SeedPlants
Zm00001e030419_P001 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants
Zm00001e035434_P001 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 173 196
IPR002885 Pentatricopeptide_repeat 552 601
IPR002885 Pentatricopeptide_repeat 471 529
IPR002885 Pentatricopeptide_repeat 401 461
IPR002885 Pentatricopeptide_repeat 647 694
IPR002885 Pentatricopeptide_repeat 226 287
IPR002885 Pentatricopeptide_repeat 296 355
No external refs found!