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  5. Nbi_g13630

Nbi_g13630 (HCF106)


Aliases : HCF106

Description : component *(cpTatB) of thylakoid membrane Tat translocation system & original description: none


Gene families : OG0005619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005619_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Nbi_g13630

Target Alias Description ECC score Gene Family Method Actions
AT5G52440 HCF106 Bacterial sec-independent translocation protein mttA/Hcf106 0.05 OrthoFinder output from all 47 species
Adi_g013959 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Aspi01Gene06021.t1 HCF106, Aspi01Gene06021 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
GSVIVT01028894001 HCF106 Protein translocation.chloroplast.thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
LOC_Os06g01290.1 HCF106, LOC_Os06g01290 Sec-independent protein translocase protein TATB,... 0.02 OrthoFinder output from all 47 species
LOC_Os11g37130.1 HCF106, LOC_Os11g37130 HCF106 protein involved in PS-II assembly. component... 0.03 OrthoFinder output from all 47 species
Len_g14600 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Lfl_g30372 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.02 OrthoFinder output from all 47 species
Mp8g12830.1 HCF106 HCF106 protein involved in PS-II assembly. component... 0.05 OrthoFinder output from all 47 species
Ore_g13537 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.05 OrthoFinder output from all 47 species
Pir_g11584 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004868 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Sam_g08783 No alias component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Solyc03g025310.3.1 HCF106, Solyc03g025310 HCF106 protein involved in PS-II assembly. component... 0.03 OrthoFinder output from all 47 species
Spa_g11354 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Zm00001e008326_P002 HCF106, Zm00001e008326 HCF106 protein involved in PS-II assembly. component... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003369 TatA/B/E 87 133
No external refs found!