1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g13529

Nbi_g13529 (Phox2)


Aliases : Phox2

Description : myosin adaptor protein *(MadB) & original description: none


Gene families : OG0001349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001349_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13529
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT4G32070 Phox4 Octicosapeptide/Phox/Bem1p (PB1) domain-containing... 0.02 OrthoFinder output from all 47 species
Als_g32074 Phox2 myosin adaptor protein *(MadB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29472 Phox2 myosin adaptor protein *(MadB) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s2245.g109978 Phox2 myosin adaptor protein *(MadB) & original description: CDS=1-3942 0.03 OrthoFinder output from all 47 species
Ceric.24G059700.1 Phox2, Ceric.24G059700 myosin adaptor protein *(MadB) & original description:... 0.05 OrthoFinder output from all 47 species
Dde_g50581 Phox2 myosin adaptor protein *(MadB) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os09g03890.1 Phox4, LOC_Os09g03890 myosin adaptor protein (MadB) 0.03 OrthoFinder output from all 47 species
Len_g22750 Phox2 myosin adaptor protein *(MadB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g30768 Phox2 myosin adaptor protein *(MadB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38707 Phox2 myosin adaptor protein *(MadB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g16542 Phox2 myosin adaptor protein *(MadB) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22548 Phox2 myosin adaptor protein *(MadB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56587 Phox2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12026 Phox2 myosin adaptor protein *(MadB) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033476_P001 Phox1, Zm00001e033476 myosin adaptor protein (MadB) 0.03 OrthoFinder output from all 47 species
Zm00001e034895_P001 Phox1, Zm00001e034895 myosin adaptor protein (MadB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 525 590
No external refs found!