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Aliases : TOM2A
Description : not classified & original description: none
Gene families : OG0001026 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001026_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g13452 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G28770 | No alias | Tetraspanin family protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g02011 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g05969 | TOM2A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g05866 | TOM2A | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08943 | TOM2A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g26082 | TOM2A | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g25841 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000829.25 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g03697 | TOM2A | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g06603 | TOM2A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01013236001 | TOM2A | External stimuli response.biotic stress.tobamovirus... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g06250.1 | TOM2A, LOC_Os08g06250 | Tobamovirus multiplication protein 2A OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05430 | TOM2A | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g35811 | TOM2A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10426146g0010 | No alias | Tetraspanin-20 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g05423 | TOM2A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g26327 | TOM2A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g00592 | TOM2A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05104 | TOM2A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g44093 | TOM2A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0088.g018542 | TOM2A | not classified & original description: CDS=285-1187 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g078450.3.1 | Solyc02g078450 | Tetraspanin-19 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07255 | TOM2A | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g11017 | TOM2A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g11018 | TOM2A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11019 | TOM2A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g50614 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05924 | TOM2A | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g44233 | TOM2A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002408_P001 | TOM2A, Zm00001e002408 | TOM2A tobamovirus multiplication replication host factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030118 | clathrin coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030125 | clathrin vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | HCCA |
| CC | GO:0030132 | clathrin coat of coated pit | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |