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  5. Nbi_g13410

Nbi_g13410


Description : not classified & original description: none


Gene families : OG0001019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g13410
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Aev_g40836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26119 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g22578 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0006.g009803 No alias not classified & original description: CDS=1-663 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026458 No alias not classified & original description: CDS=1-402 0.03 OrthoFinder output from all 47 species
Azfi_s3841.g117134 No alias not classified & original description: CDS=1-663 0.03 OrthoFinder output from all 47 species
Dac_g20008 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19878 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g46983 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g14968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g01180 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g44016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17473 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_10390025g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_133462g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g02360.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g09822 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25860 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g35659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_10090V3.1 Pp3c17_10090 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g15397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44282 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018555 No alias not classified & original description: CDS=346-906 0.03 OrthoFinder output from all 47 species
Smo439439 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g37674 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g15372 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021851 DUF3455 252 356
IPR021851 DUF3455 38 199
No external refs found!