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Description : E3 ubiquitin ligase *(PIR) & original description: none
Gene families : OG0001288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001288_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00149p00070960 | evm_27.TU.AmTr_v1... | MND1-interacting protein 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT1G03365 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g09061 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08185 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08903 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g17238 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_116958g0010 | No alias | MND1-interacting protein 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07138 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g17835 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g13596 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20727 | No alias | E3 ubiquitin ligase *(PIR) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001865 | No alias | E3 ubiquitin ligase *(PIR) & original description: CDS=1-2784 | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e033984_P001 | Zm00001e033984 | MND1-interacting protein 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034899_P001 | Zm00001e034899 | Putative E3 ubiquitin-protein ligase RF298... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046527 | PIR2-like_helical | 154 | 263 |
| No external refs found! |