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  5. Nbi_g12868

Nbi_g12868


Description : chlorophyll dephytylase *(CLD) & original description: none


Gene families : OG0002909 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002909_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12868
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00159350 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
Adi_g007112 No alias chlorophyll dephytylase *(CLD) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09149 No alias chlorophyll dephytylase *(CLD) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G043100.1 Ceric.09G043100 chlorophyll dephytylase *(CLD) & original description:... 0.04 OrthoFinder output from all 47 species
Cre16.g664350 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
Ehy_g16893 No alias chlorophyll dephytylase *(CLD) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01037084001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
MA_10433730g0010 No alias chlorophyll dephytylase (CLD) 0.04 OrthoFinder output from all 47 species
Mp7g11220.1 No alias chlorophyll dephytylase (CLD) 0.03 OrthoFinder output from all 47 species
Ore_g05598 No alias chlorophyll dephytylase *(CLD) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26338 No alias chlorophyll dephytylase *(CLD) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07646 No alias chlorophyll dephytylase *(CLD) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027039_P004 Zm00001e027039 chlorophyll dephytylase (CLD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 125 381
No external refs found!