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  5. Nbi_g12580

Nbi_g12580 (ATUBC7, UBC7)


Aliases : ATUBC7, UBC7

Description : E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1 E3 ubiquitin ligase complex & original description: none


Gene families : OG0001574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12580
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00159180 ATUBC7, UBC7,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38550.1 ATUBC7, UBC7,... component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 OrthoFinder output from all 47 species
MA_96703g0010 ATUBC7, UBC7 component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 OrthoFinder output from all 47 species
Mp4g07670.1 ATUBC7, UBC7 component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 OrthoFinder output from all 47 species
Msp_g44292 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.04 OrthoFinder output from all 47 species
Pp3c1_30730V3.1 ATUBC7, UBC7, Pp3c1_30730 ubiquitin carrier protein 7 0.01 OrthoFinder output from all 47 species
Sam_g11549 No alias E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Spa_g51195 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.05 OrthoFinder output from all 47 species
Zm00001e031834_P002 ATUBC7, UBC7,... component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 10 159
No external refs found!