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  5. Nbi_g12398

Nbi_g12398


Description : not classified & original description: none


Gene families : OG0000317 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12398
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Ala_g04722 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g36113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18775 No alias regulatory protein *(SHW) involved in photoreceptor... 0.03 OrthoFinder output from all 47 species
Aop_g04391 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0011.g012743 No alias not classified & original description: CDS=30-722 0.03 OrthoFinder output from all 47 species
Ceric.23G044100.1 Ceric.23G044100 not classified & original description: pacid=50610147... 0.03 OrthoFinder output from all 47 species
Ceric.26G028200.1 Ceric.26G028200 not classified & original description: pacid=50599089... 0.06 OrthoFinder output from all 47 species
Cre03.g203950 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g14094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27698 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g06420 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os10g37710.1 LOC_Os10g37710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g20947 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g00720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g009550.4.1 Solyc09g009550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g007030.3.1 Solyc11g007030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g12002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019210_P001 Zm00001e019210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 33 294
No external refs found!