AT1G49970 (CLPR1, SVR2, NCLPP5)


Aliases : CLPR1, SVR2, NCLPP5

Description : CLP protease proteolytic subunit 1


Gene families : OG_01_0005854 (Gene family) Phylogenetic Tree(s): OG0005854_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G49970
Cluster HCCA cluster: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Cre14.g619100 No alias 29.5.5 protein.degradation.serine protease Encodes a... 0.02 Gene family
LOC_Os05g51450 Os05g0592100 29.5.5 protein.degradation.serine protease Encodes a... 0.05 Gene family
Solyc10g049710.2.1 Solyc10g049710.2 29.5.5 protein.degradation.serine protease Encodes a... 0.05 Gene family
Zm00001d039167 GRMZM2G099529 29.5.5 protein.degradation.serine protease Encodes a... 0.05 Gene family

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009532 plastid stroma IDA Arabidopsis.org
CC GO:0009534 chloroplast thylakoid IDA Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
CC GO:0009840 chloroplastic endopeptidase Clp complex IDA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR023562 ClpP/TepA 173 354
No external refs found!