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  5. Nbi_g12232

Nbi_g12232 (VEP1, AWI31)


Aliases : VEP1, AWI31

Description : not classified & original description: none


Gene families : OG0000581 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000581_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12232
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00056400 evm_27.TU.AmTr_v1... 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata 0.05 OrthoFinder output from all 47 species
Ceric.38G017700.1 VEP1, AWI31,... not classified & original description: pacid=50579651... 0.04 OrthoFinder output from all 47 species
Dde_g10287 VEP1, AWI31 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_39604 VEP1, AWI31 no description available(sp|a0a1c9cx66|cyc2_camac : 412.0) 0.03 OrthoFinder output from all 47 species
Ppi_g60640 VEP1, AWI31 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo86439 VEP1, AWI31 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata 0.03 OrthoFinder output from all 47 species
Solyc01g091670.3.1 VEP1, AWI31,... no description available(sp|a0a1c9cx66|cyc2_camac : 432.0) 0.03 OrthoFinder output from all 47 species
Zm00001e002054_P001 VEP1, AWI31,... 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!