AT1G49540 (AtELP2, ELP2)

Aliases : AtELP2, ELP2

Description : elongator protein 2

Gene families : OG_01_0006650 (Gene family) Phylogenetic Tree(s): OG0006650_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G49540
Cluster HCCA cluster: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
Zm00001d031291 GRMZM2G042371 35.1 not ontology elongator protein 2 (ELP2) 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS
BP GO:0000398 mRNA splicing, via spliceosome RCA
CC GO:0005634 nucleus ISM
BP GO:0006261 DNA-dependent DNA replication RCA
BP GO:0006406 mRNA export from nucleus RCA
BP GO:0006606 protein import into nucleus RCA
BP GO:0009560 embryo sac egg cell differentiation RCA
BP GO:0009909 regulation of flower development RCA
BP GO:0010074 maintenance of meristem identity RCA
BP GO:0016573 histone acetylation IDA
BP GO:0044030 regulation of DNA methylation IMP
BP GO:0051604 protein maturation RCA
BP GO:1901535 regulation of DNA demethylation IMP
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 115 148
IPR001680 WD40_repeat 797 835
IPR001680 WD40_repeat 403 440
IPR001680 WD40_repeat 50 97
IPR001680 WD40_repeat 214 258
IPR001680 WD40_repeat 687 722
No external refs found!