1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g12003

Nbi_g12003


Description : pectin acetylesterase *(PAE) & original description: none


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g12003

Target Alias Description ECC score Gene Family Method Actions
AT1G09550 No alias Pectinacetylesterase family protein 0.03 OrthoFinder output from all 47 species
AT3G05910 No alias Pectinacetylesterase family protein 0.04 OrthoFinder output from all 47 species
Adi_g000516 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13644 No alias pectin acetylesterase *(PAE) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02921 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06203 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26700 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00973 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017717001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028231001 No alias Cell wall.pectin.modification and degradation.pectin... 0.02 OrthoFinder output from all 47 species
GSVIVT01031342001 No alias Cell wall.pectin.modification and degradation.pectin... 0.01 OrthoFinder output from all 47 species
GSVIVT01034178001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
Gb_04448 No alias pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Gb_15309 No alias pectin acetylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os07g44070.1 LOC_Os07g44070 pectin acetylesterase 0.09 OrthoFinder output from all 47 species
Len_g49005 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g22840.1 No alias pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Msp_g15514 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03265 No alias pectin acetylesterase *(PAE) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12455 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59674 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022387 No alias pectin acetylesterase *(PAE) & original description: CDS=96-1526 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024405 No alias not classified & original description: CDS=1-582 0.03 OrthoFinder output from all 47 species
Sam_g39303 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.05 OrthoFinder output from all 47 species
Solyc03g078260.3.1 Solyc03g078260 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Solyc10g086480.3.1 Solyc10g086480 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Solyc12g005320.3.1 Solyc12g005320 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Spa_g06322 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11809 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007043_P001 Zm00001e007043 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e018491_P002 Zm00001e018491 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e028575_P002 Zm00001e028575 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e035651_P001 Zm00001e035651 pectin acetylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 77 427
No external refs found!