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  5. Nbi_g11377

Nbi_g11377 (COP3, UNS2, HLS1)


Aliases : COP3, UNS2, HLS1

Description : not classified & original description: none


Gene families : OG0001967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g11377

Target Alias Description ECC score Gene Family Method Actions
Adi_g043430 COP3, UNS2, HLS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64836.t1 COP3, UNS2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0038.g026357 COP3, UNS2, HLS1 not classified & original description: CDS=1-1248 0.03 OrthoFinder output from all 47 species
Azfi_s0178.g056221 COP3, UNS2, HLS1 not classified & original description: CDS=75-1253 0.03 OrthoFinder output from all 47 species
Dac_g21187 COP3, UNS2, HLS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000131001 COP3, UNS2, HLS1 Probable N-acetyltransferase HLS1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01034998001 No alias Probable N-acetyltransferase HLS1-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g55530.1 LOC_Os03g55530 Probable N-acetyltransferase HLS1-like OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_131889g0010 COP3, UNS2, HLS1 Probable N-acetyltransferase HLS1-like OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp5g18090.1 No alias Probable N-acetyltransferase HLS1-like OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g38045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g14375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007840 COP3, UNS2, HLS1 not classified & original description: CDS=260-1510 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021205 COP3, UNS2, HLS1 not classified & original description: CDS=732-1952 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0267.g026963 COP3, UNS2, HLS1 not classified & original description: CDS=798-2207 0.04 OrthoFinder output from all 47 species
Solyc02g064690.3.1 COP3, UNS2,... Probable N-acetyltransferase HLS1-like OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc03g116860.3.1 COP3, UNS2,... Probable N-acetyltransferase HLS1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e030435_P001 COP3, UNS2,... Probable N-acetyltransferase HLS1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000182 GNAT_dom 74 181
No external refs found!