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  5. Nbi_g11311

Nbi_g11311 (ATARFA1B, ARFA1B)


Aliases : ATARFA1B, ARFA1B

Description : ARF-GTPase *(ARF1) & original description: none


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g11311

Target Alias Description ECC score Gene Family Method Actions
AT1G23490 ATARF1, ARF1,... ADP-ribosylation factor 1 0.05 OrthoFinder output from all 47 species
Aop_g54514 ATARFA1B, ARFA1B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62840.t1 ATARFA1B,... ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
MA_101085g0010 ARFA1E, ATARFA1E ARF-GTPase 0.03 OrthoFinder output from all 47 species
Ppi_g43193 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g092970.3.1 ATARF1, ARF1,... ARF-GTPase 0.05 OrthoFinder output from all 47 species
Solyc03g096910.3.1 ATARFB1C,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e013545_P001 ATARFB1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 8 176
No external refs found!