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  5. Nbi_g11081

Nbi_g11081 (AtCRT1a, CRT1a, CRT1)


Aliases : AtCRT1a, CRT1a, CRT1

Description : ER luminal lectin chaperone *(CRT) & original description: none


Gene families : OG0001170 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g11081
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Aev_g21047 CRT1b, AtCRT1b ER luminal lectin chaperone *(CRT) & original description: none 0.01 OrthoFinder output from all 39 species
Aev_g26121 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.01 OrthoFinder output from all 39 species
Ala_g09257 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.01 OrthoFinder output from all 39 species
Als_g10127 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 39 species
Aop_g02547 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 39 species
Cba_g20485 AtCRT1a, CRT1a, CRT1 not classified & original description: none 0.02 OrthoFinder output from all 39 species
Cba_g62429 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.01 OrthoFinder output from all 39 species
Ceric.14G039100.1 AtCRT1a, CRT1a,... ER luminal lectin chaperone *(CRT) & original... 0.01 OrthoFinder output from all 39 species
Dcu_g18966 PIP5K9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 39 species
Gb_07615 AtCRT1a, CRT1a, CRT1 lectin chaperone (CRT) 0.01 OrthoFinder output from all 39 species
Lfl_g02942 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 39 species
Ore_g31110 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001580 Calret/calnex 265 338
IPR001580 Calret/calnex 28 263
No external refs found!