Nbi_g10982 (ftsh4)


Aliases : ftsh4

Description : ATP-dependent metalloprotease *(FtsH4/11) & original description: none


Gene families : OG0001340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001340_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g10982
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Ala_g28204 ftsh4 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
Als_g32522 ftsh4 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g10762 ftsh4 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g12188 FTSH11 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEA Interproscan
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 271 400
IPR041569 AAA_lid_3 423 466
IPR000642 Peptidase_M41 482 662
No external refs found!