Nbi_g10435 (UBP10)

Aliases : UBP10

Description : deubiquitinase *(UBP5/8-11) & original description: none

Gene families : OG0001745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001745_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g10435

Target	Alias	Description	ECC score	Gene Family Method
Gb_06866	ATUBP5, UBP5, PDE323	deubiquitinase (UBP5\|8-11)	0.04	OrthoFinder output from all 47 species
Gb_11501	ATUBP5, UBP5, PDE323	deubiquitinase (UBP5\|8-11)	0.04	OrthoFinder output from all 47 species
LOC_Os10g07270.1	UBP9, LOC_Os10g07270	deubiquitinase (UBP5\|8-11)	0.02	OrthoFinder output from all 47 species
LOC_Os12g42600.1	UBP8, LOC_Os12g42600	deubiquitinase (UBP5\|8-11)	0.02	OrthoFinder output from all 47 species
Lfl_g02368	ATUBP5, UBP5, PDE323	deubiquitinase *(UBP5/8-11) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10425850g0010	ATUBP5, UBP5, PDE323	Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Smo61965	UBP9	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
Solyc08g083300.4.1	UBP9, Solyc08g083300	deubiquitinase (UBP5\|8-11)	0.04	OrthoFinder output from all 47 species
Spa_g26241	UBP10	deubiquitinase *(UBP5/8-11) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g12675	ATUBP5, UBP5, PDE323	deubiquiTinase *(UBP5/8-11) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e008908_P001	ATUBP5, UBP5,...	deubiquitinase (UBP5\|8-11)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0031124	mRNA 3'-end processing	IEP	HCCA
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
CC	GO:0070939	Dsl1/NZR complex	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006615	Pept_C19_DUSP	42	148
IPR028135	Ub_USP-typ	173	248
IPR001394	Peptidase_C19_UCH	331	933

External Links

No external refs found!

Nbi_g10435 (UBP10)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation