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  5. Nbi_g09999

Nbi_g09999 (GLR3.3, ATGLR3.3)


Aliases : GLR3.3, ATGLR3.3

Description : ligand-gated cation channel *(GLR) & original description: none


Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09999

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00227100 GLR2.2,... Solute transport.channels.GLR ligand-gated cation channel 0.03 OrthoFinder output from all 47 species
AT5G48400 ATGLR1.2, GLR1.2 Glutamate receptor family protein 0.02 OrthoFinder output from all 47 species
Aev_g13740 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g14271 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g62161 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g26350 GLR3.3, ATGLR3.3 ligand-gated cation channel *(GLR) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022297001 GLR3.6, ATGLR3.6 Solute transport.channels.GLR ligand-gated cation channel 0.02 OrthoFinder output from all 47 species
GSVIVT01033121001 GLR2.7, ATGLR2.7 Solute transport.channels.GLR ligand-gated cation channel 0.06 OrthoFinder output from all 47 species
Gb_16131 ATGLR2.9, GLR2.9 ligand-gated cation channel (GLR) 0.05 OrthoFinder output from all 47 species
Gb_26917 GLR2.7, ATGLR2.7 ligand-gated cation channel (GLR) 0.04 OrthoFinder output from all 47 species
Sam_g51319 No alias ligand-gated cation channel *(GLR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 58 405
IPR001320 Iontro_rcpt_C 406 433
No external refs found!