AT1G17020 (SRG1, ATSRG1)


Aliases : SRG1, ATSRG1

Description : senescence-related gene 1


Gene families : OG_01_0000253 (Gene family) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G17020
Cluster HCCA cluster: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018335001 No alias 16.8.4 secondary metabolism.flavonoids.flavonols Encodes... 0.02 Gene family
GSVIVT01018667001 No alias 16.8.4 secondary metabolism.flavonoids.flavonols Encodes... 0.02 Gene family
GSVIVT01018669001 No alias 16.8.4 secondary metabolism.flavonoids.flavonols Encodes... 0.03 Gene family
GSVIVT01021328001 No alias 16.8.4 secondary metabolism.flavonoids.flavonols Encodes... 0.03 Gene family
GSVIVT01021330001 No alias 16.8.4 secondary metabolism.flavonoids.flavonols Encodes... 0.03 Gene family
GSVIVT01021331001 No alias 16.8.4 secondary metabolism.flavonoids.flavonols Encodes... 0.02 Gene family
GSVIVT01021339001 No alias 16.8.4 secondary metabolism.flavonoids.flavonols Encodes... 0.03 Gene family
GSVIVT01021355001 No alias 16.8.4 secondary metabolism.flavonoids.flavonols Encodes... 0.03 Gene family
LOC_Os09g18450 Os09g0353700 16.8.4 secondary metabolism.flavonoids.flavonols Encodes... 0.05 Gene family
MA_10435878g0010 No alias No description available 0.02 Gene family
MA_579499g0010 No alias No description available 0.02 Gene family
MA_8213742g0010 No alias No description available 0.01 Gene family
Smo90714 PACid_15414872 16.8.4 secondary metabolism.flavonoids.flavonols Encodes... 0.02 Gene family
Zm00001d042192 GRMZM2G025870 No description available 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Arabidopsis.org
BP GO:0009737 response to abscisic acid RCA Arabidopsis.org
BP GO:0009793 embryo development ending in seed dormancy RCA Arabidopsis.org
BP GO:0009813 flavonoid biosynthetic process ISS Arabidopsis.org
BP GO:0009830 cell wall modification involved in abscission RCA Arabidopsis.org
BP GO:0009845 seed germination RCA Arabidopsis.org
BP GO:0010162 seed dormancy process RCA Arabidopsis.org
BP GO:0010260 animal organ senescence IEP Arabidopsis.org
BP GO:0010260 animal organ senescence RCA Arabidopsis.org
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor ISS Arabidopsis.org
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors ISS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR026992 DIOX_N 53 161
IPR005123 Oxoglu/Fe-dep_dioxygenase 211 308
No external refs found!