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  5. Nbi_g09903

Nbi_g09903


Description : component *(CAP-D2B) of condensin II complex & original description: none


Gene families : OG0008196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09903

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00227490 No alias Cell cycle.mitosis and meiosis.chromatin... 0.21 OrthoFinder output from all 47 species
Als_g15728 No alias component *(CAP-D2B) of condensin II complex & original... 0.21 OrthoFinder output from all 47 species
Aop_g06266 No alias component *(CAP-D2B) of condensin II complex & original... 0.16 OrthoFinder output from all 47 species
Aspi01Gene59031.t1 Aspi01Gene59031 component *(CAP-D2B) of condensin II complex & original... 0.17 OrthoFinder output from all 47 species
Azfi_s0136.g050948 No alias component *(CAP-D2B) of condensin II complex & original... 0.09 OrthoFinder output from all 47 species
Ceric.01G026000.1 Ceric.01G026000 component *(CAP-D2B) of condensin II complex & original... 0.27 OrthoFinder output from all 47 species
Cre05.g241150 No alias Cell cycle.mitosis and meiosis.chromatin... 0.08 OrthoFinder output from all 47 species
Dac_g36324 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Dac_g41476 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g14984 No alias component *(CAP-D2B) of condensin II complex & original... 0.33 OrthoFinder output from all 47 species
GSVIVT01017722001 No alias Cell cycle.mitosis and meiosis.chromatin... 0.23 OrthoFinder output from all 47 species
Gb_33189 No alias component CAP-D2B of condensin II complex 0.17 OrthoFinder output from all 47 species
LOC_Os12g36170.1 LOC_Os12g36170 component CAP-D2B of condensin II complex 0.16 OrthoFinder output from all 47 species
Len_g59607 No alias component *(CAP-D2B) of condensin II complex & original... 0.07 OrthoFinder output from all 47 species
MA_8028g0010 No alias component CAP-D2B of condensin II complex 0.14 OrthoFinder output from all 47 species
MA_92126g0010 No alias component CAP-D2B of condensin II complex 0.18 OrthoFinder output from all 47 species
Mp4g01570.1 No alias component CAP-D2B of condensin II complex 0.21 OrthoFinder output from all 47 species
Msp_g01246 No alias component *(CAP-D2B) of condensin II complex & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005664 No alias component *(CAP-D2B) of condensin II complex & original... 0.15 OrthoFinder output from all 47 species
Solyc12g099510.3.1 Solyc12g099510 component CAP-D2B of condensin II complex 0.02 OrthoFinder output from all 47 species
Tin_g09167 No alias component *(CAP-D2B) of condensin II complex & original... 0.22 OrthoFinder output from all 47 species
Zm00001e039691_P001 Zm00001e039691 component CAP-D2B of condensin II complex 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR032682 Cnd1_C 1116 1294
No external refs found!