Nbi_g09007 (G2484-1, ATG2484-1)


Aliases : G2484-1, ATG2484-1

Description : not classified & original description: none


Gene families : OG0002573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002573_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g09007
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00148070 G2484-1,... No description available 0.06 OrthoFinder output from all 47 species
AT4G17330 G2484-1, ATG2484-1 G2484-1 protein 0.04 OrthoFinder output from all 47 species
Adi_g077944 G2484-1, ATG2484-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g07336 G2484-1, ATG2484-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g27665 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12999 G2484-1, ATG2484-1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g23052 G2484-1, ATG2484-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12306 G2484-1, ATG2484-1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g26781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09060 G2484-1, ATG2484-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene09572.t1 G2484-1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22302 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.36G054700.1 Ceric.36G054700 not classified & original description: pacid=50568782... 0.07 OrthoFinder output from all 47 species
Dcu_g12709 G2484-1, ATG2484-1 not classified & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01004716001 G2484-1, ATG2484-1 No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01006991001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_04223 G2484-1, ATG2484-1 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_15039 G2484-1, ATG2484-1 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os10g41030.1 G2484-1,... no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g14749 G2484-1, ATG2484-1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g03523 G2484-1, ATG2484-1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_173703g0010 G2484-1, ATG2484-1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_20337g0010 G2484-1, ATG2484-1 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp6g01160.1 G2484-1, ATG2484-1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g25098 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g39400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09835 G2484-1, ATG2484-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16311 G2484-1, ATG2484-1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014511 G2484-1, ATG2484-1 not classified & original description: CDS=645-7112 0.03 OrthoFinder output from all 47 species
Sam_g18066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo415212 G2484-1, ATG2484-1 No description available 0.06 OrthoFinder output from all 47 species
Solyc08g078530.4.1 G2484-1,... no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g33264 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49740 G2484-1, ATG2484-1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08474 G2484-1, ATG2484-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002323_P004 G2484-1,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e037875_P005 G2484-1,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 1734 1800
No external refs found!