AT1G07920


Description : GTP binding Elongation factor Tu family protein


Gene families : OG_01_0000223 (Gene family) Phylogenetic Tree(s): OG0000223_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G07920
Cluster HCCA cluster: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021352.57 No alias 29.2.4 protein.synthesis.elongation GTP binding... 0.05 Gene family
GSVIVT01025147001 No alias 29.2.4 protein.synthesis.elongation GTP binding... 0.17 Gene family
GSVIVT01025638001 No alias 29.2.4 protein.synthesis.elongation GTP binding... 0.02 Gene family
LOC_Os03g08010 Os03g0177400 29.2.4 protein.synthesis.elongation GTP binding... 0.05 Gene family
Smo171512 PACid_15409631 No description available 0.01 Gene family
Solyc06g009970.3.1 Solyc06g009970.3 29.2.4 protein.synthesis.elongation GTP binding... 0.07 Gene family
Zm00001d009868 GRMZM2G151193 29.2.4 protein.synthesis.elongation GTP binding... 0.02 Gene family
Zm00001d009870 GRMZM2G110509 29.2.4 protein.synthesis.elongation GTP binding... 0.03 Gene family
Zm00001d037873 GRMZM2G154218 29.2.4 protein.synthesis.elongation GTP binding... 0.02 Gene family
Zm00001d037875 GRMZM2G149768 29.2.4 protein.synthesis.elongation GTP binding... 0.04 Gene family
Zm00001d037877 GRMZM2G001327 29.2.4 protein.synthesis.elongation GTP binding... 0.04 Gene family
Zm00001d037905 No alias 29.2.4 protein.synthesis.elongation GTP binding... 0.03 Gene family
Zm00001d046449 GRMZM2G153541 29.2.4 protein.synthesis.elongation GTP binding... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity ISS Arabidopsis.org
MF GO:0005516 calmodulin binding ISS Arabidopsis.org
CC GO:0005730 nucleolus IDA Arabidopsis.org
CC GO:0005737 cytoplasm ISM Arabidopsis.org
CC GO:0005739 mitochondrion IDA Arabidopsis.org
CC GO:0005774 vacuolar membrane IDA Arabidopsis.org
CC GO:0005829 cytosol IDA Arabidopsis.org
CC GO:0005886 plasma membrane IDA Arabidopsis.org
CC GO:0009506 plasmodesma IDA Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
BP GO:0046686 response to cadmium ion IEP Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 322 429
IPR000795 TF_GTP-bd_dom 7 222
IPR004161 EFTu-like_2 248 313
No external refs found!