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  5. Nbi_g08875

Nbi_g08875


Description : plant-specific stabilizing component *(ClpT) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0007488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007488_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g08875

Target Alias Description ECC score Gene Family Method Actions
AT4G25370 No alias Double Clp-N motif protein 0.04 OrthoFinder output from all 47 species
Adi_g100657 No alias plant-specific stabilizing component *(ClpT) of... 0.04 OrthoFinder output from all 47 species
Ala_g22471 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Aob_g02846 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18165.t1 Aspi01Gene18165 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g037001 No alias plant-specific stabilizing component *(ClpT) of... 0.02 OrthoFinder output from all 47 species
Dac_g07393 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Dde_g16574 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
LOC_Os03g14280.1 LOC_Os03g14280 plant-specific stabilizing component ClpT of chloroplast... 0.02 OrthoFinder output from all 47 species
Len_g10201 No alias plant-specific stabilizing component *(ClpT) of... 0.04 OrthoFinder output from all 47 species
MA_12551g0010 No alias plant-specific stabilizing component ClpT of chloroplast... 0.02 OrthoFinder output from all 47 species
MA_377212g0010 No alias plant-specific stabilizing component ClpT of chloroplast... 0.02 OrthoFinder output from all 47 species
Sam_g11082 No alias plant-specific stabilizing component *(ClpT) of... 0.07 OrthoFinder output from all 47 species
Sam_g11083 No alias plant-specific stabilizing component *(ClpT) of... 0.04 OrthoFinder output from all 47 species
Tin_g10438 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Zm00001e001033_P002 Zm00001e001033 plant-specific stabilizing component ClpT of chloroplast... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 209 246
IPR004176 Clp_R_dom 121 173
No external refs found!