AT1G01250


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT1G01250
Cluster HCCA cluster: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT4G36900 DEAR4, RAP2.10 related to AP2 10 0.02 Gene family
GSVIVT01001089001 No alias No description available 0.03 Gene family
GSVIVT01009801001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01015540001 No alias No description available 0.02 Gene family
GSVIVT01032785001 No alias No description available 0.04 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.02 Gene family
LOC_Os03g22170 Os03g0341000 No description available 0.02 Gene family
LOC_Os04g34970 Os04g0429050 No description available 0.03 Gene family
LOC_Os07g42510 Os07g0617000 No description available 0.02 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.02 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_16778g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_502153g0010 No alias No description available 0.02 Gene family
MA_5530g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_7960347g0010 No alias No description available 0.02 Gene family
MA_97319g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Smo104978 PACid_15415926 No description available 0.02 Gene family
Smo409196 PACid_15422590 No description available 0.01 Gene family
Solyc03g117130.3.1 Solyc03g117130.3 No description available 0.02 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.02 Gene family
Solyc09g091950.1.1 Solyc09g091950.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.02 Gene family
Zm00001d012584 GRMZM2G132223 No description available 0.02 Gene family
Zm00001d026486 GRMZM2G104260 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d031498 GRMZM2G016079 No description available 0.02 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d035835 GRMZM2G135452 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.02 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d047860 GRMZM2G007406 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.02 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Arabidopsis.org
MF GO:0003700 DNA-binding transcription factor activity ISS Arabidopsis.org
CC GO:0005634 nucleus ISS Arabidopsis.org
CC GO:0005634 nucleus ISM Arabidopsis.org
BP GO:0006355 regulation of transcription, DNA-templated ISS Arabidopsis.org
BP GO:0009409 response to cold RCA Arabidopsis.org
BP GO:0009414 response to water deprivation RCA Arabidopsis.org
BP GO:0009737 response to abscisic acid RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 43 93
No external refs found!