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Nbi_g07021 (UPL3, KAK)


Aliases : UPL3, KAK

Description : E3 ubiquitin ligase *(UPL3) & original description: none


Gene families : OG0001729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g07021
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Adi_g022381 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02725 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011365 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: CDS=427-5601 0.04 OrthoFinder output from all 47 species
Ceric.02G085400.1 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g21337 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024033001 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Len_g19132 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25162 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17671 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g111530.3.1 UPL3, KAK, Solyc01g111530 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Zm00001e013385_P003 UPL3, KAK, Zm00001e013385 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 1521 1922
No external refs found!