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  5. Nbi_g06861

Nbi_g06861 (ATSCO1/CPEF-G, SCO1, ATSCO1)


Aliases : ATSCO1/CPEF-G, SCO1, ATSCO1

Description : translation elongation factor *(EF-G) & original description: none


Gene families : OG0002078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g06861
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00031690 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT1G62750 ATSCO1/CPEF-G,... Translation elongation factor EFG/EF2 protein 0.05 OrthoFinder output from all 47 species
Adi_g024951 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Adi_g087916 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Aev_g08240 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Ala_g02375 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.13 OrthoFinder output from all 47 species
Aob_g05315 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.08 OrthoFinder output from all 47 species
Aop_g06164 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.09 OrthoFinder output from all 47 species
Aspi01Gene31691.t1 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023510 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Cba_g01251 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Ceric.04G106300.1 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.09 OrthoFinder output from all 47 species
Cre02.g076250 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dac_g00996 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.07 OrthoFinder output from all 47 species
Ehy_g01583 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01006035001 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Gb_36066 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.06 OrthoFinder output from all 47 species
LOC_Os04g45490.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.05 OrthoFinder output from all 47 species
Len_g12465 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Len_g18043 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g02343 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.08 OrthoFinder output from all 47 species
Mp7g06620.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.02 OrthoFinder output from all 47 species
Msp_g07900 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.07 OrthoFinder output from all 47 species
Ore_g06596 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Ppi_g15053 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Sam_g17251 No alias translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Smo143627 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Solyc08g079180.3.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.04 OrthoFinder output from all 47 species
Spa_g05896 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Tin_g01189 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e007402_P001 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.03 OrthoFinder output from all 47 species
Zm00001e041325_P001 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 411 478
IPR000640 EFG_V-like 688 774
IPR000795 T_Tr_GTP-bd_dom 96 368
IPR005517 Transl_elong_EFG/EF2_IV 566 684
IPR041095 EFG_II 491 564
No external refs found!