Nbi_g06334 (EST3, MRP4, ATMRP4, ABCC4)

Aliases : EST3, MRP4, ATMRP4, ABCC4

Description : subfamily ABCC transporter & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g06334

Target	Alias	Description	ECC score	Gene Family Method
AT1G30400	ABCC1, ATABCC1,...	multidrug resistance-associated protein 1	0.02	OrthoFinder output from all 47 species
Als_g07445	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene67415.t1	EST3, MRP4,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0011.g012714	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=165-4181	0.03	OrthoFinder output from all 47 species
Cba_g17215	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cre13.g564900	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Dac_g36989	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g27253	MRP10, ATMRP10, ABCC14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01028722001	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
MA_10434115g0010	EST3, MRP4, ATMRP4, ABCC4	ABC transporter C family member 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_11781g0010	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
MA_11781g0020	MRP6, ATMRP6, ABCC8	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Pir_g18005	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g58277	ABCC12, MRP13, ATMRP13	subfamily ABCC transporter & original description: none	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001687	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=1-2715	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001693	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=1-1395	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010393	MRP11, ABCC13, ATMRP11	subfamily ABCC transporter & original description: CDS=2-4279	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025351	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: CDS=562-5160	0.02	OrthoFinder output from all 47 species
Sam_g23741	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Solyc10g024420.3.1	MRP9, ABCC9,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Tin_g17323	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	957	1216
IPR011527	ABC1_TM_dom	320	587
IPR003439	ABC_transporter-like_ATP-bd	1289	1437
IPR003439	ABC_transporter-like_ATP-bd	651	784

External Links

No external refs found!

Nbi_g06334 (EST3, MRP4, ATMRP4, ABCC4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation