Nbi_g05882 (WRKY4)

Aliases : WRKY4

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g05882

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00088p00164440	AtWRKY20,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.02	OrthoFinder output from all 47 species
AT5G07100	WRKY26	WRKY DNA-binding protein 26	0.03	OrthoFinder output from all 47 species
Adi_g058353	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g083283	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g117757	AtWRKY20, WRKY20	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g39367	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g18778	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20940	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g08377	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g26276	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g60353	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene15984.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene17672.t1	WRKY28,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52709.t1	Aspi01Gene52709	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52849.t1	Aspi01Gene52849	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0245.g059987	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: CDS=1-2319	0.03	OrthoFinder output from all 47 species
Cba_g19526	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g61706	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g27869	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g33224	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g11334	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g11137	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01022245001	ATWRKY51, WRKY51	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
LOC_Os01g43650.1	WRKY28,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os02g53100.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g09020.1	ATWRKY50,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g49100.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g28971	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g05639	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g09240	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
MA_10426942g0010	ATWRKY24, WRKY24	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g06292	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g19074	ATWRKY51, WRKY51	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15530	WRKY4	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g22356	ATWRKY57, WRKY57	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g22242	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022367	ATWRKY58, WRKY58	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g10405	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc05g050340.4.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc10g005680.2.1	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Tin_g03844	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g16789	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e005219_P001	WRKY1, ZAP1,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e021431_P001	WRKY75,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e022143_P002	WRKY4, Zm00001e022143	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e025937_P001	WRKY72,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027804_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e040369_P001	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
MF	GO:0004629	phospholipase C activity	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
MF	GO:1904680	peptide transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	481	537
IPR003657	WRKY_dom	310	366

External Links

No external refs found!

Nbi_g05882 (WRKY4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation