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  5. Nbi_g05880

Nbi_g05880 (PLDBETA1, PLDBETA)


Aliases : PLDBETA1, PLDBETA

Description : EC_3.1 hydrolase acting on ester bond & original description: none


Gene families : OG0000229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05880

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00260980 PLDALPHA4,... Lipid metabolism.lipid degradation.phospholipase... 0.03 OrthoFinder output from all 47 species
Aop_g58761 PLDALPHA1, PLD EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
LOC_Os06g40190.1 PLDALPHA1, PLD,... phospholipase D (PLD-alpha) 0.02 OrthoFinder output from all 47 species
Pnu_g33047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001736 PLipase_D/transphosphatidylase 357 391
IPR025202 PLD-like_dom 553 736
IPR000008 C2_dom 29 158
IPR024632 PLipase_D_C 774 844
No external refs found!