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  5. Nbi_g05433

Nbi_g05433 (ATRPA70A, RPA1A,...)


Aliases : ATRPA70A, RPA1A, ATRPA1A, RPA70A

Description : component *(RPA1) of RPA presynaptic filament assembly factor complex & original description: none


Gene families : OG0002229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002229_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05433

Target Alias Description ECC score Gene Family Method Actions
Ehy_g25492 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
MA_3716589g0010 ATRPA70A, RPA1A,... component RPA1 of RPA presynaptic filament assembly... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR013955 Rep_factor-A_C 529 678
IPR007199 Rep_factor-A_N 5 101
IPR004365 NA-bd_OB_tRNA 258 341
IPR031657 REPA_OB_2 368 472
IPR001878 Znf_CCHC 809 824
No external refs found!