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  5. Nbi_g05423

Nbi_g05423


Description : component *(Sec23) of Sec23/24 cargo adaptor subcomplex & original description: none


Gene families : OG0001171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001171_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g05423

Target Alias Description ECC score Gene Family Method Actions
AT1G05520 No alias Sec23/Sec24 protein transport family protein 0.03 OrthoFinder output from all 47 species
AT3G23660 No alias Sec23/Sec24 protein transport family protein 0.03 OrthoFinder output from all 47 species
AT4G14160 No alias Sec23/Sec24 protein transport family protein 0.03 OrthoFinder output from all 47 species
Adi_g015675 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Adi_g083866 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Aev_g02536 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Aev_g04854 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Azfi_s0118.g046613 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Cba_g18092 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Dcu_g08265 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Dcu_g08281 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
GSVIVT01026719001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 OrthoFinder output from all 47 species
LOC_Os09g28610.1 LOC_Os09g28610 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
Len_g09133 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Mp7g12190.1 No alias component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
Ppi_g02309 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Ppi_g04623 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Ppi_g30808 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Solyc05g053830.3.1 Solyc05g053830 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.04 OrthoFinder output from all 47 species
Spa_g17950 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Spa_g53620 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Tin_g03473 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Tin_g10965 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Zm00001e008888_P001 Zm00001e008888 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
Zm00001e009959_P002 Zm00001e009959 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
Zm00001e021415_P001 Zm00001e021415 component Sec23 of Sec23/24 cargo adaptor subcomplex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000009 alpha-1,6-mannosyltransferase activity IEP HCCA
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0004376 glycolipid mannosyltransferase activity IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 122 390
IPR007123 Gelsolin-like_dom 633 719
IPR006895 Znf_Sec23_Sec24 54 92
IPR012990 Sec23_24_beta_S 401 504
IPR006900 Sec23/24_helical_dom 519 617
No external refs found!