Aliases : RPL2.1
Description : component *(uL2c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Nbi_g04996 | |
Cluster | HCCA: Cluster_31 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
ATCG00830 | RPL2.1 | ribosomal protein L2 | 0.12 | OrthoFinder output from all 47 species | |
ATCG01310 | RPL2.2 | ribosomal protein L2 | 0.12 | OrthoFinder output from all 47 species | |
Aev_g14432 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.22 | OrthoFinder output from all 47 species | |
Aev_g24286 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.15 | OrthoFinder output from all 47 species | |
Ala_g18429 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Ala_g38158 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Als_g02447 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Aob_g13898 | RPL2.1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g03784 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
Cba_g04596 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.05G042700.1 | RPL2.1, Ceric.05G042700 | not classified & original description: pacid=50577724... | 0.15 | OrthoFinder output from all 47 species | |
Ceric.05G048500.1 | RPL2.1, Ceric.05G048500 | component *(uL2c) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
Ceric.07G017400.1 | RPL2.1, Ceric.07G017400 | not classified & original description: pacid=50626616... | 0.26 | OrthoFinder output from all 47 species | |
Ceric.09G020100.1 | RPL2.1, Ceric.09G020100 | not classified & original description: pacid=50586708... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.1Z020200.1 | RPL2.1, Ceric.1Z020200 | not classified & original description: pacid=50586367... | 0.11 | OrthoFinder output from all 47 species | |
Ceric.1Z164200.1 | RPL2.1, Ceric.1Z164200 | not classified & original description: pacid=50596959... | 0.17 | OrthoFinder output from all 47 species | |
Ceric.23G029300.1 | Ceric.23G029300 | not classified & original description: pacid=50611505... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.25G023800.1 | Ceric.25G023800 | not classified & original description: pacid=50593099... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.38G009500.1 | RPL2.1, Ceric.38G009500 | not classified & original description: pacid=50580350... | 0.25 | OrthoFinder output from all 47 species | |
Ceric.38G057600.1 | Ceric.38G057600 | not classified & original description: pacid=50579815... | 0.11 | OrthoFinder output from all 47 species | |
Dcu_g49833 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Dde_g06655 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.12 | OrthoFinder output from all 47 species | |
Dde_g21793 | RPL2 | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Gb_17475 | RPL2.1 | 50S ribosomal protein L2, chloroplastic OS=Cycas... | 0.04 | OrthoFinder output from all 47 species | |
Gb_20139 | RPL2.1 | component psRPS11 of small ribosomal subunit proteome | 0.09 | OrthoFinder output from all 47 species | |
Gb_24024 | RPL2.1 | 50S ribosomal protein L2, chloroplastic OS=Cycas... | 0.04 | OrthoFinder output from all 47 species | |
Gb_25047 | RPL2.1 | 50S ribosomal protein L2, chloroplastic OS=Cycas... | 0.04 | OrthoFinder output from all 47 species | |
Gb_37512 | RPL2.1 | 50S ribosomal protein L2, chloroplastic OS=Cycas... | 0.02 | OrthoFinder output from all 47 species | |
Len_g13282 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g13189 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
Mp1g19370.1 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Ore_g43250 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.12 | OrthoFinder output from all 47 species | |
Pir_g37334 | No alias | component *(uL2m) of large mitoribosomal-subunit... | 0.24 | OrthoFinder output from all 47 species | |
Smo137825 | RPL2.1 | Protein biosynthesis.organelle translation... | 0.15 | OrthoFinder output from all 47 species | |
Solyc00g500150.1.1 | RPL2.1, Solyc00g500150 | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
Solyc00g500152.1.1 | RPL2.1, Solyc00g500152 | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.05 | OrthoFinder output from all 47 species | |
Solyc09g050068.1.1 | RPL2.1, Solyc09g050068 | 50S ribosomal protein L2, chloroplastic OS=Solanum... | 0.04 | OrthoFinder output from all 47 species | |
Solyc10g012217.1.1 | RPL2.1, Solyc10g012217 | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g21720 | RPL2.1 | component *(uL2c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0003954 | NADH dehydrogenase activity | IEP | HCCA |
MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
BP | GO:0015994 | chlorophyll metabolic process | IEP | HCCA |
BP | GO:0015995 | chlorophyll biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046148 | pigment biosynthetic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No external refs found! |