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  5. Nbi_g04869

Nbi_g04869 (CASP, AtCASP)


Aliases : CASP, AtCASP

Description : Golgin-type membrane tethering protein *(CASP) & original description: none


Gene families : OG0004640 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004640_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04869
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT3G18480 CASP, AtCASP CCAAT-displacement protein alternatively spliced product 0.05 OrthoFinder output from all 47 species
Ala_g15856 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Aob_g06697 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
Aop_g00768 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Ceric.18G007100.1 CASP, AtCASP,... Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
Cre04.g223900 CASP, AtCASP No description available 0.02 OrthoFinder output from all 47 species
Dcu_g12650 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Ehy_g02808 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01008258001 CASP, AtCASP Vesicle trafficking.target membrane tethering.Golgi... 0.03 OrthoFinder output from all 47 species
LOC_Os03g50300.1 CASP, AtCASP,... golgin (CASP) 0.03 OrthoFinder output from all 47 species
Lfl_g01912 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
Mp6g21020.1 CASP, AtCASP golgin (CASP) 0.02 OrthoFinder output from all 47 species
Pir_g19296 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
Ppi_g14626 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0259.g026865 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
Solyc06g069210.3.1 CASP, AtCASP,... golgin (CASP) 0.02 OrthoFinder output from all 47 species
Spa_g26747 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.06 OrthoFinder output from all 47 species
Zm00001e012195_P001 CASP, AtCASP,... golgin (CASP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEA Interproscan
BP GO:0006891 intra-Golgi vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR012955 CASP_C 455 678
No external refs found!