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  5. Nbi_g04742

Nbi_g04742 (ATPDI12, PDI12,...)


Aliases : ATPDI12, PDI12, PDIL5-3, ATPDIL5-3

Description : Golgi-ER retrograde trafficking cargo receptor *(PDI-C) & original description: none


Gene families : OG0004997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004997_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04742
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Ala_g13417 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.06 OrthoFinder output from all 47 species
Als_g31776 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.03 OrthoFinder output from all 47 species
Aop_g13215 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.02 OrthoFinder output from all 47 species
Azfi_s0076.g037750 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.06 OrthoFinder output from all 47 species
Ceric.33G019900.1 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.1 OrthoFinder output from all 47 species
Cre02.g104350 PDIL5-4, ATPDI7,... Protein disulfide-isomerase 5-4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g19195 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.02 OrthoFinder output from all 47 species
Ehy_g27467 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.06 OrthoFinder output from all 47 species
Len_g16222 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.03 OrthoFinder output from all 47 species
Lfl_g03953 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.06 OrthoFinder output from all 47 species
MA_158493g0010 ATPDI12, PDI12,... Protein disulfide isomerase-like 5-4 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Pir_g05583 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.02 OrthoFinder output from all 47 species
Ppi_g14011 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.04 OrthoFinder output from all 47 species
Spa_g00405 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.04 OrthoFinder output from all 47 species
Tin_g05576 ATPDI12, PDI12,... Golgi-ER retrograde trafficking cargo receptor *(PDI-C)... 0.06 OrthoFinder output from all 47 species
Zm00001e010491_P001 ATPDI12, PDI12,... Protein disulfide isomerase-like 5-4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR039542 Erv_N 8 97
IPR012936 Erv_C 291 462
IPR013766 Thioredoxin_domain 144 239
No external refs found!