1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g04659

Nbi_g04659 (CCB3, atylmg3, YLMG3)


Aliases : CCB3, atylmg3, YLMG3

Description : assembly factor CCB3 of CCB cytochrome b6 maturation system (system IV) & original description: none


Gene families : OG0006561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006561_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g04659

Target Alias Description ECC score Gene Family Method Actions
Cba_g04968 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Ceric.13G022000.1 CCB3, atylmg3,... assembly factor CCB3 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
Dac_g13312 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Dcu_g02417 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.1 OrthoFinder output from all 47 species
GSVIVT01010180001 CCB3, atylmg3, YLMG3 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.07 OrthoFinder output from all 47 species
Gb_04602 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.04 OrthoFinder output from all 47 species
LOC_Os01g73540.1 CCB3, atylmg3,... assembly factor CCB3 of CCB cytochrome b6 maturation... 0.08 OrthoFinder output from all 47 species
Len_g10269 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Mp4g21240.1 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.02 OrthoFinder output from all 47 species
Msp_g29461 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.1 OrthoFinder output from all 47 species
Pir_g12781 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.13 OrthoFinder output from all 47 species
Pnu_g00555 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species
Pp3c10_19880V3.1 CCB3, atylmg3,... cofactor assembly, complex C (B6F) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019313 CCB3, atylmg3, YLMG3 assembly factor CCB3 of CCB cytochrome b6 maturation... 0.05 OrthoFinder output from all 47 species
Zm00001e028271_P001 CCB3, atylmg3,... assembly factor CCB3 of CCB cytochrome b6 maturation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003425 CCB3/YggT 190 258
No external refs found!