Nbi_g04347 (ATPA)

Aliases : ATPA

Description : subunit alpha of peripheral CF1 subcomplex of ATP synthase complex & original description: none

Gene families : OG0000676 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g04347
Cluster	HCCA: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
ATCG00120	ATPA	ATP synthase subunit alpha	0.01	OrthoFinder output from all 39 species
Aev_g01324	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 39 species
Als_g15224	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 39 species
Aob_g02403	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 39 species
Cba_g02611	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.07	OrthoFinder output from all 39 species
Ceric.01G056900.1	ATPA, Ceric.01G056900	not classified & original description: pacid=50591476...	0.05	OrthoFinder output from all 39 species
Ceric.01G105100.1	ATPA, Ceric.01G105100	not classified & original description: pacid=50591645...	0.02	OrthoFinder output from all 39 species
Ceric.09G009000.1	ATPA, Ceric.09G009000	not classified & original description: pacid=50586770...	0.05	OrthoFinder output from all 39 species
Ceric.09G009300.1	ATPA, Ceric.09G009300	not classified & original description: pacid=50588520...	0.04	OrthoFinder output from all 39 species
Ceric.19G010500.1	ATPA, Ceric.19G010500	not classified & original description: pacid=50575425...	0.04	OrthoFinder output from all 39 species
Ceric.1Z117200.1	ATPA, Ceric.1Z117200	not classified & original description: pacid=50577000...	0.03	OrthoFinder output from all 39 species
Ceric.29G005300.1	ATPA, Ceric.29G005300	not classified & original description: pacid=50625733...	0.04	OrthoFinder output from all 39 species
Ceric.29G005400.1	ATPA, Ceric.29G005400	not classified & original description: pacid=50625214...	0.03	OrthoFinder output from all 39 species
Dcu_g21289	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 39 species
LOC_Os04g16740.1	ATPA, LOC_Os04g16740	subunit alpha of peripheral CF1 subcomplex of ATP...	0.01	OrthoFinder output from all 39 species
LOC_Os10g21240.1	ATPA, LOC_Os10g21240	subunit alpha of peripheral CF1 subcomplex of ATP...	0.01	OrthoFinder output from all 39 species
Len_g28142	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 39 species
Lfl_g02090	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 39 species
Ore_g20650	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.01	OrthoFinder output from all 39 species
Pir_g18655	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.12	OrthoFinder output from all 39 species
Ppi_g05924	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.07	OrthoFinder output from all 39 species
Sacu_v1.1_s2240.g028298	ATPA	not classified & original description: CDS=1-471	0.03	OrthoFinder output from all 39 species
Sacu_v1.1_s2240.g028299	ATPA	not classified & original description: CDS=1-399	0.03	OrthoFinder output from all 39 species
Sam_g00615	No alias	subunit alpha of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 39 species
Solyc00g500050.1.1	ATPA, Solyc00g500050	subunit alpha of peripheral CF1 subcomplex of ATP...	0.01	OrthoFinder output from all 39 species
Solyc00g500133.1.1	ATPA, Solyc00g500133	subunit alpha of peripheral CF1 subcomplex of ATP...	0.01	OrthoFinder output from all 39 species
Solyc00g500203.1.1	ATPA, Solyc00g500203	subunit alpha of peripheral CF1 subcomplex of ATP...	0.01	OrthoFinder output from all 39 species
Solyc00g500292.1.1	ATPA, Solyc00g500292	subunit alpha of peripheral CF1 subcomplex of ATP...	0.01	OrthoFinder output from all 39 species
Solyc00g500323.1.1	ATPA, Solyc00g500323	subunit alpha of peripheral CF1 subcomplex of ATP...	0.01	OrthoFinder output from all 39 species
Solyc00g500332.1.1	ATPA, Solyc00g500332	subunit alpha of peripheral CF1 subcomplex of ATP...	0.01	OrthoFinder output from all 39 species
Spa_g08033	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 39 species
Tin_g28548	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	IEA	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004100	ATPase_F1/V1/A1_a/bsu_N	29	94
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd	151	366
IPR000793	ATP_synth_asu_C	373	497

External Links

No external refs found!

Nbi_g04347 (ATPA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation