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  5. Nbi_g03721

Nbi_g03721 (AT-GT2, GT2)


Aliases : AT-GT2, GT2

Description : not classified & original description: none


Gene families : OG0000670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g03721

Target Alias Description ECC score Gene Family Method Actions
Aev_g09267 AT-GT2, GT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16838 emb2746 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12241 emb2746 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G068400.1 Ceric.25G068400 not classified & original description: pacid=50594219... 0.03 OrthoFinder output from all 47 species
Ehy_g06898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06474 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_28594 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g05565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10005 emb2746 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16747 AT-GT2, GT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo409669 AT-GT2, GT2 No description available 0.02 OrthoFinder output from all 47 species
Spa_g18640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07330 emb2746 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 159 241
IPR044822 Myb_DNA-bind_4 509 589
No external refs found!