Nbi_g02600


Description : not classified & original description: none


Gene families : OG0004312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004312_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02600

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00036430 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT3G02120 No alias hydroxyproline-rich glycoprotein family protein 0.03 OrthoFinder output from all 47 species
Adi_g016964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32387 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g10509 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Aspi01Gene26216.t1 Aspi01Gene26216 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene67734.t1 Aspi01Gene67734 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g00383 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.27G022500.1 Ceric.27G022500 not classified & original description: pacid=50605994... 0.07 OrthoFinder output from all 47 species
Dac_g12700 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g16238 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g42889 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01032906001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_03841 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_25601 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_26295 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Len_g15554 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g22213 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g40624 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_16252g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Mp1g00810.1 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Pir_g56128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g22942 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc02g088830.4.1 Solyc02g088830 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g30948 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g34819 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g32711 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g41878 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!