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  5. Nbi_g01964

Nbi_g01964


Description : not classified & original description: none


Gene families : OG0006143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01964

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00203340 evm_27.TU.AmTr_v1... GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g012500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22081 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g19160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009893 No alias not classified & original description: CDS=1-903 0.04 OrthoFinder output from all 47 species
Ceric.25G026200.1 Ceric.25G026200 not classified & original description: pacid=50594372... 0.07 OrthoFinder output from all 47 species
Dac_g17788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10149 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01018924001 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_05092 No alias GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os05g49220.1 LOC_Os05g49220 GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
MA_124092g0010 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
Mp2g20310.1 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
Ore_g28699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007350 No alias not classified & original description: CDS=95-1276 0.04 OrthoFinder output from all 47 species
Sam_g11943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo75698 No alias GTPase ERA1, chloroplastic OS=Zea mays 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 160 277
IPR004044 KH_dom_type_2 362 438
No external refs found!