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  5. Nbi_g01414

Nbi_g01414 (CID3)


Aliases : CID3

Description : not classified & original description: none


Gene families : OG0002546 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002546_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01414
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT3G14010 CID4 CTC-interacting domain 4 0.03 OrthoFinder output from all 47 species
Aop_g14344 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G002100.1 CID3, Ceric.33G002100 not classified & original description: pacid=50607016... 0.05 OrthoFinder output from all 47 species
Dac_g15553 CID4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g27950.1 CID4, LOC_Os02g27950 Polyadenylate-binding protein-interacting protein 4... 0.03 OrthoFinder output from all 47 species
Mp7g15450.1 CID4 Polyadenylate-binding protein-interacting protein 4... 0.02 OrthoFinder output from all 47 species
Ppi_g03955 CID4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g062860.4.1 CID4, Solyc06g062860 Polyadenylate-binding protein-interacting protein 4... 0.02 OrthoFinder output from all 47 species
Spa_g11492 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11817 CID4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12824 CID4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024706_P002 CID4, Zm00001e024706 Polyadenylate-binding protein-interacting protein 4... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR009604 LsmAD_domain 245 316
IPR025852 SM_dom_ATX 89 169
No external refs found!