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  5. Nbi_g01273

Nbi_g01273


Description : subunit beta of phenylalanine-tRNA ligase complex & original description: none


Gene families : OG0005200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005200_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01273
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Aop_g14148 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024823 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021464.35 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Cre13.g603900 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Dcu_g04791 No alias subunit beta of phenylalanine-tRNA ligase complex &... 0.03 OrthoFinder output from all 47 species
LOC_Os05g48510.1 LOC_Os05g48510 subunit beta of phenylalanine-tRNA ligase complex 0.03 OrthoFinder output from all 47 species
Mp8g07720.1 No alias subunit beta of phenylalanine-tRNA ligase complex 0.01 OrthoFinder output from all 47 species
Zm00001e029739_P002 Zm00001e029739 subunit beta of phenylalanine-tRNA ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004826 phenylalanine-tRNA ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006474 N-terminal protein amino acid acetylation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018206 peptidyl-methionine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031414 N-terminal protein acetyltransferase complex IEP HCCA
CC GO:0031417 NatC complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR040659 PhetRS_B1 1 89
IPR041616 PheRS_beta_core 381 591
IPR005147 tRNA_synthase_B5-dom 308 378
IPR005146 B3/B4_tRNA-bd 119 280
No external refs found!