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Nbi_g00957 (ATNAP1, ATABC1, ABC1, LAF6)


Aliases : ATNAP1, ATABC1, ABC1, LAF6

Description : component *(SUF-B) of plastidial SUF system assembly phase & original description: none


Gene families : OG0003465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00957

Target Alias Description ECC score Gene Family Method Actions
AT4G04770 ATNAP1, ATABC1,... ATP binding cassette protein 1 0.02 OrthoFinder output from all 47 species
Adi_g113695 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.05 OrthoFinder output from all 47 species
Ala_g02055 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Als_g30574 ATNAP1, ATABC1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33257 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Aob_g06605 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Aop_g04268 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Cba_g06617 ATNAP1, ATABC1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08367 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.05 OrthoFinder output from all 47 species
Cba_g20728 ATNAP1, ATABC1,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.24G058200.1 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.05 OrthoFinder output from all 47 species
Cre15.g643600 ATNAP1, ATABC1,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.03 OrthoFinder output from all 47 species
Dac_g07409 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.07 OrthoFinder output from all 47 species
GSVIVT01012742001 ATNAP1, ATABC1,... UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_18941 ATNAP1, ATABC1,... component SUF-B of plastidial SUF system assembly phase 0.03 OrthoFinder output from all 47 species
Len_g48705 ATNAP1, ATABC1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03265 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.05 OrthoFinder output from all 47 species
Ore_g09293 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Pir_g10779 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Ppi_g16641 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Sam_g17039 No alias component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Solyc02g080440.3.1 ATNAP1, ATABC1,... component SUF-B of plastidial SUF system assembly phase 0.03 OrthoFinder output from all 47 species
Spa_g48790 ATNAP1, ATABC1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51506 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Zm00001e019397_P001 ATNAP1, ATABC1,... component SUF-B of plastidial SUF system assembly phase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016226 iron-sulfur cluster assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000825 SUF_FeS_clus_asmbl_SufBD 293 526
IPR045595 SufBD_N 211 275
No external refs found!