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  5. Nbi_g00604

Nbi_g00604


Description : thiol-disulfide oxidoreductase *(LTO1) & original description: none


Gene families : OG0004555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00604

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00178450 evm_27.TU.AmTr_v1... Protein modification.disulfide bond... 0.03 OrthoFinder output from all 47 species
Aev_g06675 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.05 OrthoFinder output from all 47 species
Ala_g09310 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.05 OrthoFinder output from all 47 species
Als_g16128 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.04 OrthoFinder output from all 47 species
Aob_g03219 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.09 OrthoFinder output from all 47 species
Aspi01Gene70714.t1 Aspi01Gene70714 thiol-disulfide oxidoreductase *(LTO1) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0006.g010185 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G007300.1 Ceric.12G007300 thiol-disulfide oxidoreductase *(LTO1) & original... 0.07 OrthoFinder output from all 47 species
Cre12.g493150 No alias Protein modification.disulfide bond... 0.02 OrthoFinder output from all 47 species
Dac_g11430 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g19068 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.06 OrthoFinder output from all 47 species
Dde_g01392 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g10583 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.09 OrthoFinder output from all 47 species
LOC_Os03g03949.2 LOC_Os03g03949 LTO1 protein involved in PS-II assembly. thiol-disulfide... 0.03 OrthoFinder output from all 47 species
Len_g11522 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.07 OrthoFinder output from all 47 species
Mp2g11540.1 No alias LTO1 protein involved in PS-II assembly. thiol-disulfide... 0.04 OrthoFinder output from all 47 species
Msp_g04590 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.05 OrthoFinder output from all 47 species
Ore_g07405 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.08 OrthoFinder output from all 47 species
Pnu_g07937 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023911 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.05 OrthoFinder output from all 47 species
Sam_g38735 No alias thiol-disulfide oxidoreductase *(LTO1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR012932 VKOR 90 220
No external refs found!